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M. Megraw, Baev, V., Rusinov, V., Jensen, S. T., Kalantidis, K., and Hatzigeorgiou, A. G., MicroRNA promoter element discovery in Arabidopsis., RNA, vol. 12, no. 9, pp. 1612-9, 2006.
M. Megraw, Cumbie, J. S., Ivanchenko, M. G., and Filichkin, S. A., Small Genetic Circuits and MicroRNAs: Big Players in Polymerase II Transcriptional Control in Plants., Plant Cell, vol. 28, no. 2, pp. 286-303, 2016.
M. Megraw, Sethupathy, P., Corda, B., and Hatzigeorgiou, A. G., miRGen: a database for the study of animal microRNA genomic organization and function., Nucleic Acids Res, vol. 35, no. Database issue, pp. D149-55, 2007.
M. Megraw, Pereira, F., Jensen, S. T., Ohler, U., and Hatzigeorgiou, A. G., A transcription factor affinity-based code for mammalian transcription initiation., Genome Res, vol. 19, no. 4, pp. 644-56, 2009.
M. Megraw and Hatzigeorgiou, A. G., MicroRNA promoter analysis., Methods Mol Biol, vol. 592, pp. 149-61, 2010.
M. Megraw, Mukherjee, S., and Ohler, U., Sustained-input switches for transcription factors and microRNAs are central building blocks of eukaryotic gene circuits., Genome Biol, vol. 14, no. 8, p. R85, 2013.