Publications

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Journal Article
M. Megraw, Pereira, F., Jensen, S. T., Ohler, U., and Hatzigeorgiou, A. G., “A transcription factor affinity-based code for mammalian transcription initiation.”, Genome Res, vol. 19, no. 4, pp. 644-56, 2009.
T. Morton, Wong, W. - K., and Megraw, M., “TIPR: transcription initiation pattern recognition on a genome scale.”, Bioinformatics, vol. 31, no. 23, pp. 3725-32, 2015.
T. Morton, Petricka, J., Corcoran, D. L., Li, S., Winter, C. M., Carda, A., Benfey, P. N., Ohler, U., and Megraw, M., “Paired-end analysis of transcription start sites in Arabidopsis reveals plant-specific promoter signatures.”, Plant Cell, vol. 26, no. 7, pp. 2746-60, 2014.
J. S. Cumbie, Ivanchenko, M. G., and Megraw, M., “NanoCAGE-XL and CapFilter: an approach to genome wide identification of high confidence transcription start sites.”, BMC Genomics, vol. 16, p. 597, 2015.
M. Megraw, Baev, V., Rusinov, V., Jensen, S. T., Kalantidis, K., and Hatzigeorgiou, A. G., “MicroRNA promoter element discovery in Arabidopsis.”, RNA, vol. 12, no. 9, pp. 1612-9, 2006.