M. G.  Ivanchenko, Zhu, J., Wang, B., Medvecká, E., Du, Y., Azzarello, E., Mancuso, S., Megraw, M., Filichkin, S., Dubrovsky, J. G., Friml, J., and Geisler, M., ?The cyclophilin A DIAGEOTROPICA gene affects auxin transport in both root and shoot to control lateral root formation.?, Development, vol. 142, no. 4, pp. 712-21, 2015.

S. A.  Filichkin, Cumbie, J. S., Dharmawardhana, P., Jaiswal, P., Chang, J. H., Palusa, S. G., Reddy, A. S. N., Megraw, M., and Mockler, T. C., ?Environmental stresses modulate abundance and timing of alternatively spliced circadian transcripts in Arabidopsis.?, Mol Plant, vol. 8, no. 2, pp. 207-27, 2015.

J. S.  Cumbie, Ivanchenko, M. G., and Megraw, M., ?NanoCAGE-XL and CapFilter: an approach to genome wide identification of high confidence transcription start sites.?, BMC Genomics, vol. 16, p. 597, 2015.

T.  Morton, Petricka, J., Corcoran, D. L., Li, S., Winter, C. M., Carda, A., Benfey, P. N., Ohler, U., and Megraw, M., ?Paired-end analysis of transcription start sites in Arabidopsis reveals plant-specific promoter signatures.?, Plant Cell, vol. 26, no. 7, pp. 2746-60, 2014.

M.  Megraw, Mukherjee, S., and Ohler, U., ?Sustained-input switches for transcription factors and microRNAs are central building blocks of eukaryotic gene circuits.?, Genome Biol, vol. 14, no. 8, p. R85, 2013.

J. J.  Petricka, Schauer, M. A., Megraw, M., Breakfield, N. W., J Thompson, W., Georgiev, S., Soderblom, E. J., Ohler, U., Moseley, M. Arthur, Grossniklaus, U., and Benfey, P. N., ?The protein expression landscape of the Arabidopsis root.?, Proc Natl Acad Sci U S A, vol. 109, no. 18, pp. 6811-8, 2012.

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M.  Megraw, Baev, V., Rusinov, V., Jensen, S. T., Kalantidis, K., and Hatzigeorgiou, A. G., ?MicroRNA promoter element discovery in Arabidopsis.?, RNA, vol. 12, no. 9, pp. 1612-9, 2006.