Publications

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Author Title Type [ Year(Desc)]
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2015
S. Filichkin, Priest, H. D., Megraw, M., and Mockler, T. C., Alternative splicing in plants: directing traffic at the crossroads of adaptation and environmental stress., Curr Opin Plant Biol, vol. 24, pp. 125-35, 2015.
M. G. Ivanchenko, Zhu, J., Wang, B., Medvecká, E., Du, Y., Azzarello, E., Mancuso, S., Megraw, M., Filichkin, S., Dubrovsky, J. G., Friml, J., and Geisler, M., The cyclophilin A DIAGEOTROPICA gene affects auxin transport in both root and shoot to control lateral root formation., Development, vol. 142, no. 4, pp. 712-21, 2015.
S. A. Filichkin, Cumbie, J. S., Dharmawardhana, P., Jaiswal, P., Chang, J. H., Palusa, S. G., Reddy, A. S. N., Megraw, M., and Mockler, T. C., Environmental stresses modulate abundance and timing of alternatively spliced circadian transcripts in Arabidopsis., Mol Plant, vol. 8, no. 2, pp. 207-27, 2015.
J. S. Cumbie, Filichkin, S. A., and Megraw, M., Improved DNase-seq protocol facilitates high resolution mapping of DNase I hypersensitive sites in roots in Arabidopsis thaliana., Plant Methods, vol. 11, p. 42, 2015.
J. S. Cumbie, Ivanchenko, M. G., and Megraw, M., NanoCAGE-XL and CapFilter: an approach to genome wide identification of high confidence transcription start sites., BMC Genomics, vol. 16, p. 597, 2015.
T. Morton, Wong, W. - K., and Megraw, M., TIPR: transcription initiation pattern recognition on a genome scale., Bioinformatics, vol. 31, no. 23, pp. 3725-32, 2015.