Publications

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Journal Article
M. Megraw, Cumbie, J. S., Ivanchenko, M. G., and Filichkin, S. A., “Small Genetic Circuits and MicroRNAs: Big Players in Polymerase II Transcriptional Control in Plants.”, Plant Cell, vol. 28, no. 2, pp. 286-303, 2016.
J. S. Cumbie, Ivanchenko, M. G., and Megraw, M., “NanoCAGE-XL and CapFilter: an approach to genome wide identification of high confidence transcription start sites.”, BMC Genomics, vol. 16, p. 597, 2015.
J. S. Cumbie, Filichkin, S. A., and Megraw, M., “Improved DNase-seq protocol facilitates high resolution mapping of DNase I hypersensitive sites in roots in Arabidopsis thaliana.”, Plant Methods, vol. 11, p. 42, 2015.
S. A. Filichkin, Cumbie, J. S., J Dharmawadhana, P., Jaiswal, P., Chang, J. H., Palusa, S. G., Reddy, A. S. N., Megraw, M., and Mockler, T. C., “Environmental Stresses Modulate Abundance and Timing of Alternatively Spliced Circadian Transcripts in Arabidopsis.”, Mol Plant, 2014.
S. A. Filichkin, Cumbie, J. S., Dharmawardhana, P., Jaiswal, P., Chang, J. H., Palusa, S. G., Reddy, A. S. N., Megraw, M., and Mockler, T. C., “Environmental stresses modulate abundance and timing of alternatively spliced circadian transcripts in Arabidopsis.”, Mol Plant, vol. 8, no. 2, pp. 207-27, 2015.